Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | AMED_RS38160 | Not Available | Negative | 8237401 - 8238927 | 54555.0 |
| gntr family transcriptional regulator | AMED_RS38165 | Not Available | Positive | 8239171 - 8239566 | 14336.2 |
| abc transporter atp-binding protein | AMED_RS38170 | Not Available | Positive | 8239563 - 8240444 | 31314.9 |
| transporter | AMED_RS38175 | Not Available | Positive | 8240441 - 8241424 | 35262.6 |
| alpha/beta hydrolase | AMED_RS38180 | Not Available | Positive | 8241446 - 8242558 | 40150.6 |
| esterase | AMED_RS38185 | Not Available | Positive | 8242555 - 8244690 | 75771.0 |
| phb depolymerase family esterase | AMED_RS38190 | Not Available | Negative | 8244759 - 8245670 | 32336.4 |
| sgnh/gdsl hydrolase family protein | AMED_RS38195 | Not Available | Negative | 8245712 - 8246452 | 25612.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS38200 | Not Available | Negative | 8246709 - 8247467 | 25845.8 |
| ferritin | AMED_RS38205 | Not Available | Positive | 8247515 - 8248051 | 20256.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
