Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain-containing protein | AMED_RS38110 | Not Available | Negative | 8223340 - 8225172 | 63064.3 |
| error-prone dna polymerase | AMED_RS38115 | Not Available | Negative | 8225253 - 8228579 | 120102.0 |
| rna polymerase sigma factor | AMED_RS38120 | Not Available | Negative | 8228711 - 8229916 | 42818.3 |
| ycii family protein | AMED_RS38125 | Not Available | Negative | 8229913 - 8230275 | 12989.5 |
| dihydrofolate reductase family protein | AMED_RS38130 | Not Available | Negative | 8230291 - 8231016 | 25749.7 |
| orn/lys/arg decarboxylase n-terminal domain-containing protein | AMED_RS38135 | Not Available | Negative | 8231112 - 8233403 | 82683.7 |
| dna polymerase y family protein | AMED_RS38140 | Not Available | Negative | 8233549 - 8235129 | 55571.6 |
| hypothetical protein | AMED_RS38145 | Not Available | Negative | 8235328 - 8236005 | 22711.7 |
| sam-dependent methyltransferase | AMED_RS38150 | Not Available | Negative | 8236126 - 8237043 | 33104.9 |
| hypothetical protein | AMED_RS38155 | Not Available | Negative | 8237024 - 8237179 | 5327.19 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
