Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS03730 | Not Available | Positive | 779530 - 779877 | 12671.7 |
| wxg100 family type vii secretion target | AMED_RS03735 | Not Available | Positive | 780129 - 780455 | 12038.0 |
| wxg100 family type vii secretion target | AMED_RS03740 | Not Available | Positive | 780512 - 780805 | 10513.1 |
| duf4333 domain-containing protein | AMED_RS03745 | Not Available | Negative | 780906 - 781622 | 24731.6 |
| hypothetical protein | AMED_RS03750 | Not Available | Negative | 781652 - 782545 | 31812.0 |
| 50s ribosomal protein l13 | AMED_RS03755 | Not Available | Positive | 782807 - 783259 | 16605.2 |
| 30s ribosomal protein s9 | AMED_RS03760 | Not Available | Positive | 783274 - 783837 | 19852.4 |
| phosphoglucosamine mutase | AMED_RS03765 | Not Available | Positive | 784044 - 785378 | 44968.7 |
| cytochrome p450 | AMED_RS03770 | Not Available | Negative | 785364 - 786248 | 30354.3 |
| fatty acyl-amp ligase | AMED_RS03775 | Not Available | Positive | 786279 - 787817 | 54879.2 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
