Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | AMED_RS38060 | Not Available | Negative | 8216678 - 8216878 | 6827.1 |
| tetr/acrr family transcriptional regulator | AMED_RS38065 | Not Available | Negative | 8216898 - 8217518 | 22239.8 |
| cytochrome p450 | AMED_RS38070 | Not Available | Negative | 8217515 - 8218723 | 43469.1 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS38075 | Not Available | Negative | 8218906 - 8219340 | 15875.6 |
| tetr/acrr family transcriptional regulator | AMED_RS38080 | Not Available | Negative | 8219337 - 8219909 | 19958.2 |
| aldo/keto reductase | AMED_RS38085 | Not Available | Positive | 8219997 - 8221019 | 37030.0 |
| llm class flavin-dependent oxidoreductase | AMED_RS38090 | Not Available | Positive | 8221016 - 8221870 | 31009.1 |
| marr family winged helix-turn-helix transcriptional regulator | AMED_RS38095 | Not Available | Negative | 8222263 - 8222679 | 14923.9 |
| srpbcc family protein | AMED_RS38100 | Not Available | Positive | 8222733 - 8223143 | 14749.4 |
| cellulose binding domain-containing protein | AMED_RS49200 | Not Available | Negative | 8223140 - 8223436 | 10646.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
