Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AMED_RS38010 | Not Available | Positive | 8206511 - 8207311 | 28717.1 |
| spoiie family protein phosphatase | AMED_RS38015 | Not Available | Positive | 8207371 - 8208540 | 41695.5 |
| stas domain-containing protein | AMED_RS38020 | Not Available | Positive | 8208537 - 8208881 | 11278.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AMED_RS38025 | Not Available | Negative | 8209233 - 8210069 | 28764.9 |
| lysr family transcriptional regulator | AMED_RS38030 | Not Available | Positive | 8210142 - 8211101 | 33558.7 |
| class i sam-dependent methyltransferase | AMED_RS38035 | Not Available | Negative | 8211055 - 8211777 | 26217.2 |
| hypothetical protein | AMED_RS38040 | Not Available | Positive | 8211872 - 8212144 | 10185.4 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | AMED_RS38045 | Not Available | Positive | 8212156 - 8213979 | 64762.4 |
| bnr repeat-containing protein | AMED_RS38050 | Not Available | Negative | 8213991 - 8215421 | 50775.3 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS38055 | Not Available | Negative | 8215500 - 8216681 | 40542.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
