Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS37960 | Not Available | Negative | 8195420 - 8195977 | 18828.7 |
| carbohydrate abc transporter permease | AMED_RS37965 | Not Available | Negative | 8195974 - 8196804 | 30710.1 |
| carbohydrate abc transporter permease | AMED_RS37970 | Not Available | Negative | 8196801 - 8197742 | 34285.1 |
| abc transporter substrate-binding protein | AMED_RS37975 | Not Available | Negative | 8197754 - 8199040 | 44659.9 |
| hypothetical protein | AMED_RS37980 | Not Available | Positive | 8199325 - 8202051 | 99109.2 |
| gdsl-type esterase/lipase family protein | AMED_RS37985 | Not Available | Positive | 8202048 - 8203070 | 36436.8 |
| hypothetical protein | AMED_RS37990 | Not Available | Positive | 8203171 - 8204139 | 34528.0 |
| stas domain-containing protein | AMED_RS37995 | Not Available | Positive | 8204359 - 8204730 | 12574.2 |
| hypothetical protein | AMED_RS38000 | Not Available | Negative | 8204731 - 8205738 | 37135.4 |
| tetr/acrr family transcriptional regulator | AMED_RS38005 | Not Available | Positive | 8205792 - 8206460 | 23893.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
