Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysyl oxidase family protein | AMED_RS37910 | Not Available | Positive | 8181984 - 8182925 | 33046.1 |
| meds domain-containing protein | AMED_RS37915 | Not Available | Negative | 8182882 - 8183646 | 26351.9 |
| voc family protein | AMED_RS37920 | Not Available | Negative | 8183793 - 8184170 | 13820.2 |
| right-handed parallel beta-helix repeat-containing protein | AMED_RS37925 | Not Available | Negative | 8184299 - 8185615 | 45987.8 |
| glycoside hydrolase family 2 | AMED_RS37930 | Not Available | Negative | 8185630 - 8187822 | 76122.3 |
| rhamnogalacturonan lyase | AMED_RS37935 | Not Available | Negative | 8187822 - 8189645 | 64683.3 |
| rhamnogalacturonan acetylesterase | AMED_RS37940 | Not Available | Negative | 8189665 - 8190720 | 35738.8 |
| cellulase family glycosylhydrolase | AMED_RS37945 | Not Available | Negative | 8190759 - 8193026 | 78098.9 |
| glycosyl hydrolase 53 family protein | AMED_RS37950 | Not Available | Negative | 8193196 - 8194368 | 41656.6 |
| laci family dna-binding transcriptional regulator | AMED_RS37955 | Not Available | Negative | 8194365 - 8195423 | 37237.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
