Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS37860 | Not Available | Positive | 8169415 - 8170269 | 28061.3 |
| glycosyltransferase 87 family protein | AMED_RS37865 | Not Available | Positive | 8170443 - 8171612 | 40555.1 |
| oligosaccharide flippase family protein | AMED_RS37870 | Not Available | Positive | 8171609 - 8173033 | 47810.8 |
| glycosyltransferase | AMED_RS37875 | Not Available | Positive | 8173030 - 8174139 | 39214.3 |
| glycosyltransferase family 4 protein | AMED_RS37880 | Not Available | Positive | 8174136 - 8175266 | 39547.9 |
| putative glycoside hydrolase family 15 protein | AMED_RS37885 | Not Available | Negative | 8175398 - 8176804 | 50834.7 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | AMED_RS37890 | Not Available | Negative | 8176786 - 8178216 | 51502.9 |
| glycosyltransferase | AMED_RS37895 | Not Available | Positive | 8178531 - 8179361 | 30018.1 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS37900 | Not Available | Positive | 8179366 - 8180676 | 47703.1 |
| non-hydrolyzing udp-n-acetylglucosamine 2-epimerase | AMED_RS37905 | Not Available | Negative | 8180646 - 8181821 | 41632.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
