Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | AMED_RS37760 | Not Available | Positive | 8145091 - 8145990 | 30729.2 |
| ricin domain-containing protein | AMED_RS37765 | Not Available | Positive | 8146270 - 8149326 | 107655.0 |
| duf6204 family protein | AMED_RS37770 | Not Available | Negative | 8149428 - 8149742 | 11611.8 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | AMED_RS37775 | Not Available | Positive | 8149874 - 8152135 | 78429.3 |
| tigr01777 family oxidoreductase | AMED_RS37780 | Not Available | Negative | 8152183 - 8153274 | 38375.8 |
| ubp-type zinc finger domain-containing protein | AMED_RS37785 | Not Available | Negative | 8153956 - 8154306 | 12485.2 |
| glycoside hydrolase family 5 protein | AMED_RS37790 | Not Available | Positive | 8154547 - 8155746 | 43452.9 |
| abc transporter permease | AMED_RS37795 | Not Available | Negative | 8155765 - 8156490 | 25889.8 |
| abc transporter atp-binding protein | AMED_RS37800 | Not Available | Negative | 8156487 - 8157212 | 25721.3 |
| glycoside hydrolase family 9 protein | AMED_RS37805 | Not Available | Negative | 8157381 - 8160260 | 99474.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
