Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| psts family phosphate abc transporter substrate-binding protein | AMED_RS37710 | Not Available | Positive | 8133147 - 8134964 | 64103.2 |
| tetr family transcriptional regulator | AMED_RS37715 | Not Available | Negative | 8134977 - 8135603 | 22663.0 |
| acyl-coa dehydrogenase family protein | AMED_RS37720 | Not Available | Positive | 8135688 - 8136917 | 42714.8 |
| trypsin-like serine protease | AMED_RS37725 | Not Available | Positive | 8137453 - 8138253 | 27344.8 |
| o-antigen ligase | AMED_RS37730 | Not Available | Positive | 8138250 - 8139698 | 50336.2 |
| sgnh/gdsl hydrolase family protein | AMED_RS37735 | Not Available | Positive | 8139772 - 8140620 | 30515.2 |
| hypothetical protein | AMED_RS37740 | Not Available | Positive | 8140790 - 8141287 | 17674.2 |
| amidase | AMED_RS37745 | Not Available | Positive | 8141549 - 8143018 | 52235.4 |
| hypothetical protein | AMED_RS37750 | Not Available | Positive | 8143067 - 8143912 | 28190.8 |
| alcohol dehydrogenase catalytic domain-containing protein | AMED_RS37755 | Not Available | Negative | 8143914 - 8144999 | 37282.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
