Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyltransferase family protein | AMED_RS37660 | Not Available | Negative | 8121988 - 8122548 | 20760.5 |
| duf1508 domain-containing protein | AMED_RS37665 | Not Available | Positive | 8122796 - 8123188 | 14532.1 |
| psts family phosphate abc transporter substrate-binding protein | AMED_RS37670 | Not Available | Positive | 8123430 - 8124419 | 33877.4 |
| sortase | AMED_RS37675 | Not Available | Negative | 8124478 - 8125350 | 30031.8 |
| hypothetical protein | AMED_RS37680 | Not Available | Negative | 8125347 - 8127668 | 79303.6 |
| phosphate abc transporter permease subunit pstc | AMED_RS37685 | Not Available | Positive | 8127892 - 8128881 | 34400.8 |
| phosphate abc transporter permease psta | AMED_RS37690 | Not Available | Positive | 8128878 - 8129996 | 40119.2 |
| phosphate abc transporter atp-binding protein | AMED_RS37695 | Not Available | Positive | 8130005 - 8130820 | 29012.9 |
| substrate-binding domain-containing protein | AMED_RS37700 | Not Available | Positive | 8130817 - 8132334 | 52935.8 |
| duf6313 family protein | AMED_RS37705 | Not Available | Positive | 8132462 - 8133160 | 25633.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
