Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS37610 | Not Available | Negative | 8102227 - 8102766 | 19785.8 |
| leucine-rich repeat domain-containing protein | AMED_RS37615 | Not Available | Negative | 8102782 - 8103666 | 33288.2 |
| rhs repeat-associated core domain-containing protein | AMED_RS37620 | Not Available | Negative | 8103676 - 8110449 | 237290.0 |
| lamg-like jellyroll fold domain-containing protein | AMED_RS37625 | Not Available | Positive | 8110850 - 8115943 | 172604.0 |
| hypothetical protein | AMED_RS49195 | Not Available | Negative | 8116846 - 8117049 | 6820.39 |
| class i sam-dependent methyltransferase | AMED_RS37635 | Not Available | Negative | 8117379 - 8118449 | 39739.8 |
| serine hydrolase | AMED_RS37640 | Not Available | Negative | 8118626 - 8119312 | 24913.4 |
| tetr/acrr family transcriptional regulator | AMED_RS37645 | Not Available | Negative | 8119475 - 8120092 | 22228.5 |
| arac family transcriptional regulator | AMED_RS37650 | Not Available | Negative | 8120185 - 8121117 | 33021.9 |
| nad(p)h-binding protein | AMED_RS37655 | Not Available | Positive | 8121199 - 8122014 | 28835.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
