Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMED_RS37560 | Not Available | Positive | 8088064 - 8088813 | 25412.3 |
| bifunctional transcriptional activator/dna repair enzyme adaa | AMED_RS37565 | Not Available | Negative | 8088853 - 8089743 | 32885.7 |
| cytochrome p450 | AMED_RS37570 | Not Available | Negative | 8089953 - 8091221 | 46359.3 |
| rna polymerase subunit sigma-70 | AMED_RS37575 | Not Available | Positive | 8091643 - 8092359 | 26644.8 |
| fad-binding protein | AMED_RS37580 | Not Available | Negative | 8092484 - 8094010 | 56227.4 |
| llm class f420-dependent oxidoreductase | AMED_RS37585 | Not Available | Positive | 8094527 - 8095474 | 34648.1 |
| dihydrofolate reductase family protein | AMED_RS37590 | Not Available | Positive | 8095563 - 8096138 | 20794.0 |
| mfs transporter | AMED_RS37595 | Not Available | Negative | 8096247 - 8097713 | 50175.4 |
| hypothetical protein | AMED_RS37600 | Not Available | Positive | 8098284 - 8098829 | 18932.8 |
| hypothetical protein | AMED_RS37605 | Not Available | Positive | 8098939 - 8102142 | 109519.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
