Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS49185 | Not Available | Negative | 8081780 - 8081937 | 5898.95 |
| nad(p)h-binding protein | AMED_RS37510 | Not Available | Negative | 8081963 - 8082814 | 29541.3 |
| helix-turn-helix transcriptional regulator | AMED_RS37515 | Not Available | Positive | 8082929 - 8083243 | 11465.1 |
| hypothetical protein | AMED_RS37520 | Not Available | Negative | 8083365 - 8083634 | 9827.27 |
| sdr family oxidoreductase | AMED_RS37525 | Not Available | Negative | 8083791 - 8084663 | 30517.6 |
| sgcj/ecac family oxidoreductase | AMED_RS37530 | Not Available | Negative | 8084896 - 8085333 | 15723.4 |
| hypothetical protein | AMED_RS48345 | Not Available | Negative | 8085524 - 8086078 | 20728.8 |
| fo synthase | AMED_RS49750 | Not Available | Negative | 8086227 - 8086334 | 4137.98 |
| fo synthase | AMED_RS49755 | Not Available | Negative | 8086334 - 8086858 | 18642.4 |
| llm class flavin-dependent oxidoreductase | AMED_RS37555 | Not Available | Positive | 8087099 - 8088061 | 35456.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
