Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS37460 | Not Available | Negative | 8073529 - 8073807 | 10721.9 |
| hypothetical protein | AMED_RS37465 | Not Available | Positive | 8073937 - 8074533 | 21982.9 |
| hypothetical protein | AMED_RS37470 | Not Available | Negative | 8074530 - 8075690 | 41773.9 |
| imma/irre family metallo-endopeptidase | AMED_RS37475 | Not Available | Negative | 8075683 - 8076792 | 40327.0 |
| hypothetical protein | AMED_RS49180 | Not Available | Negative | 8077335 - 8077592 | 9215.63 |
| duf2637 domain-containing protein | AMED_RS37485 | Not Available | Negative | 8077910 - 8078686 | 28129.8 |
| is3 family transposase | AMED_RS37490 | Not Available | Negative | 8078734 - 8079651 | 33551.6 |
| is3 family transposase | AMED_RS48340 | Not Available | Negative | 8079651 - 8079974 | 11988.4 |
| tetr/acrr family transcriptional regulator | AMED_RS37500 | Not Available | Negative | 8080615 - 8081223 | 21311.4 |
| srpbcc domain-containing protein | AMED_RS37505 | Not Available | Positive | 8081270 - 8081779 | 18719.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
