Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMED_RS37410 | Not Available | Positive | 8065698 - 8067005 | 44414.7 |
| hypothetical protein | AMED_RS49160 | Not Available | Negative | 8067102 - 8067353 | 9341.95 |
| hypothetical protein | AMED_RS37420 | Not Available | Positive | 8067388 - 8068689 | 47497.8 |
| dihydropteroate synthase | AMED_RS49165 | Not Available | Negative | 8068600 - 8069151 | 19902.2 |
| metal-dependent hydrolase | AMED_RS37430 | Not Available | Positive | 8069044 - 8069277 | 8193.76 |
| npcbm/new2 domain-containing protein | AMED_RS37435 | Not Available | Negative | 8069310 - 8070002 | 23306.7 |
| citrate/2-methylcitrate synthase | AMED_RS49170 | Not Available | Negative | 8069941 - 8070642 | 25965.2 |
| hypothetical protein | AMED_RS49175 | Not Available | Positive | 8070547 - 8070771 | 7945.58 |
| hypothetical protein | AMED_RS37450 | Not Available | Negative | 8071134 - 8072069 | 34529.9 |
| hypothetical protein | AMED_RS37455 | Not Available | Negative | 8072283 - 8073425 | 43891.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
