Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat-associated core domain-containing protein | AMED_RS37315 | Not Available | Negative | 8043519 - 8048243 | 160387.0 |
| nlpc/p60 family protein | AMED_RS37320 | Not Available | Negative | 8048981 - 8049976 | 34619.1 |
| hypothetical protein | AMED_RS37325 | Not Available | Negative | 8049973 - 8052057 | 73850.7 |
| atp-binding protein | AMED_RS37330 | Not Available | Negative | 8052110 - 8054677 | 92929.4 |
| hypothetical protein | AMED_RS37335 | Not Available | Negative | 8054689 - 8055069 | 13974.2 |
| hypothetical protein | AMED_RS37340 | Not Available | Negative | 8055150 - 8055389 | 8442.59 |
| conjugal transfer protein | AMED_RS37345 | Not Available | Negative | 8055406 - 8056296 | 30682.6 |
| hypothetical protein | AMED_RS37350 | Not Available | Negative | 8056405 - 8057268 | 31135.0 |
| hypothetical protein | AMED_RS37355 | Not Available | Negative | 8057730 - 8058206 | 16899.1 |
| hypothetical protein | AMED_RS37360 | Not Available | Negative | 8058221 - 8059528 | 47089.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
