Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS37270 | Not Available | Negative | 8032649 - 8034976 | 80551.5 |
| hypothetical protein | AMED_RS37275 | Not Available | Negative | 8035079 - 8035384 | 10861.1 |
| duf4417 domain-containing protein | AMED_RS37280 | Not Available | Negative | 8035384 - 8036475 | 39978.8 |
| parb/repb/spo0j family partition protein | AMED_RS37285 | Not Available | Negative | 8036472 - 8037584 | 40071.4 |
| replication-relaxation family protein | AMED_RS37290 | Not Available | Negative | 8037581 - 8038435 | 31823.6 |
| type iv secretory system conjugative dna transfer family protein | AMED_RS37295 | Not Available | Negative | 8038441 - 8040615 | 79608.8 |
| lsr2 family protein | AMED_RS37300 | Not Available | Positive | 8040822 - 8041226 | 14434.8 |
| hypothetical protein | AMED_RS37305 | Not Available | Negative | 8041264 - 8041896 | 22314.6 |
| hypothetical protein | AMED_RS49155 | Not Available | Positive | 8042084 - 8042233 | 5150.84 |
| hypothetical protein | AMED_RS37310 | Not Available | Negative | 8043043 - 8043468 | 15611.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
