Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate hydratase c-terminal domain-containing protein | AMED_RS37220 | Not Available | Positive | 8024995 - 8025627 | 23022.8 |
| 3-hydroxyacyl-coa dehydrogenase family protein | AMED_RS37225 | Not Available | Positive | 8025624 - 8026484 | 30183.3 |
| hypothetical protein | AMED_RS37230 | Not Available | Negative | 8026519 - 8026800 | 10340.2 |
| n-6 dna methylase | AMED_RS37235 | Not Available | Negative | 8026841 - 8027701 | 30174.1 |
| hypothetical protein | AMED_RS37240 | Not Available | Positive | 8027797 - 8028660 | 31448.1 |
| hypothetical protein | AMED_RS37245 | Not Available | Positive | 8028868 - 8029161 | 11102.9 |
| hypothetical protein | AMED_RS37250 | Not Available | Negative | 8029132 - 8029575 | 16037.8 |
| hypothetical protein | AMED_RS37255 | Not Available | Negative | 8029572 - 8029805 | 8340.15 |
| hypothetical protein | AMED_RS37260 | Not Available | Negative | 8030236 - 8030682 | 16406.5 |
| hypothetical protein | AMED_RS37265 | Not Available | Negative | 8030670 - 8032649 | 69179.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
