Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketopantoate reductase family protein | AMED_RS37170 | Not Available | Negative | 8015280 - 8016263 | 34151.9 |
| enoyl-coa hydratase-related protein | AMED_RS37175 | Not Available | Positive | 8016563 - 8017387 | 29509.3 |
| glutathione synthase | AMED_RS37180 | Not Available | Negative | 8017426 - 8018361 | 33188.9 |
| amidohydrolase | AMED_RS37185 | Not Available | Negative | 8018358 - 8019260 | 31811.9 |
| carboxymuconolactone decarboxylase family protein | AMED_RS37190 | Not Available | Negative | 8019264 - 8019899 | 23376.0 |
| caib/baif coa-transferase family protein | AMED_RS37195 | Not Available | Negative | 8019952 - 8021133 | 42255.3 |
| glutathione s-transferase | AMED_RS37200 | Not Available | Negative | 8021130 - 8021777 | 23991.7 |
| gntr family transcriptional regulator | AMED_RS37205 | Not Available | Negative | 8021860 - 8022597 | 27266.5 |
| mfs transporter | AMED_RS37210 | Not Available | Negative | 8022654 - 8023964 | 46609.6 |
| fumarate hydratase | AMED_RS37215 | Not Available | Positive | 8024112 - 8024981 | 30966.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
