Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate kinase | AMED_RS03625 | Not Available | Positive | 757628 - 758182 | 20047.9 |
| type i methionyl aminopeptidase | AMED_RS03630 | Not Available | Positive | 758227 - 759003 | 26762.7 |
| translation initiation factor if-1 | AMED_RS03635 | Not Available | Positive | 759261 - 759482 | 8475.43 |
| 50s ribosomal protein l36 | AMED_RS03640 | Not Available | Positive | 759520 - 759633 | 4417.7 |
| 30s ribosomal protein s13 | AMED_RS03645 | Not Available | Positive | 759840 - 760220 | 14436.7 |
| hypothetical protein | AMED_RS03650 | Not Available | Positive | 760217 - 760402 | 6556.0 |
| 30s ribosomal protein s11 | AMED_RS03655 | Not Available | Positive | 760421 - 760828 | 14355.3 |
| 30s ribosomal protein s4 | AMED_RS03660 | Not Available | Positive | 760852 - 761457 | 23312.3 |
| dna-directed rna polymerase subunit alpha | AMED_RS03665 | Not Available | Positive | 761565 - 762635 | 38199.2 |
| 50s ribosomal protein l17 | AMED_RS03670 | Not Available | Positive | 762680 - 763228 | 19808.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
