Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | AMED_RS37070 | Not Available | Negative | 7990116 - 7990991 | 32005.5 |
| sugar phosphate isomerase/epimerase | AMED_RS37075 | Not Available | Negative | 7991021 - 7992037 | 37954.2 |
| sugar phosphate isomerase/epimerase | AMED_RS37080 | Not Available | Negative | 7992034 - 7992936 | 32176.6 |
| hypothetical protein | AMED_RS37085 | Not Available | Negative | 7992954 - 7993871 | 33574.9 |
| heme-degrading domain-containing protein | AMED_RS37090 | Not Available | Negative | 7993868 - 7994338 | 16433.6 |
| gfo/idh/moca family protein | AMED_RS37095 | Not Available | Negative | 7994335 - 7995390 | 36995.1 |
| mfs transporter | AMED_RS37100 | Not Available | Positive | 7995534 - 7996796 | 44666.5 |
| laci family dna-binding transcriptional regulator | AMED_RS37105 | Not Available | Negative | 7996839 - 7997882 | 37183.4 |
| extracellular solute-binding protein | AMED_RS37110 | Not Available | Positive | 7998254 - 7999636 | 48179.6 |
| carbohydrate abc transporter permease | AMED_RS37115 | Not Available | Positive | 7999633 - 8000562 | 33675.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
