Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | AMED_RS36970 | Not Available | Negative | 7970648 - 7971832 | 41248.4 |
| ferredoxin | AMED_RS36975 | Not Available | Negative | 7971829 - 7972029 | 6914.23 |
| zinc-binding dehydrogenase | AMED_RS36980 | Not Available | Negative | 7972049 - 7973062 | 34614.8 |
| hypothetical protein | AMED_RS36985 | Not Available | Negative | 7973107 - 7973625 | 19338.4 |
| sensor histidine kinase | AMED_RS36990 | Not Available | Positive | 7973784 - 7974959 | 40947.1 |
| response regulator transcription factor | AMED_RS36995 | Not Available | Positive | 7974956 - 7975615 | 23355.5 |
| amp-binding protein | AMED_RS49740 | Not Available | Negative | 7975674 - 7976285 | 22153.2 |
| amp-binding protein | AMED_RS49745 | Not Available | Negative | 7976285 - 7977565 | 45799.9 |
| cdar family transcriptional regulator | AMED_RS37010 | Not Available | Negative | 7977662 - 7978630 | 34095.1 |
| mandelate racemase/muconate lactonizing enzyme family protein | AMED_RS37015 | Not Available | Positive | 7979094 - 7980233 | 40907.9 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
