Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-dependent hydrolase | AMED_RS49140 | Not Available | Negative | 7966534 - 7966596 | 2023.53 |
| hypothetical protein | AMED_RS49145 | Not Available | Positive | 7966632 - 7966820 | 6929.45 |
| tetr/acrr family transcriptional regulator | AMED_RS36930 | Not Available | Positive | 7967269 - 7967964 | 26356.7 |
| pyruvate dehydrogenase e1 component subunit beta | AMED_RS48510 | Not Available | Negative | 7967981 - 7968145 | 5593.69 |
| hypothetical protein | AMED_RS48515 | Not Available | Negative | 7968082 - 7968234 | 5495.5 |
| hypothetical protein | AMED_RS48520 | Not Available | Negative | 7968249 - 7968554 | 10420.4 |
| thiamine pyrophosphate-dependent enzyme | AMED_RS48525 | Not Available | Negative | 7968761 - 7968916 | 5464.38 |
| thiamine pyrophosphate-dependent enzyme | AMED_RS48530 | Not Available | Negative | 7968868 - 7969134 | 9386.19 |
| acyl-coa dehydrogenase family protein | AMED_RS36960 | Not Available | Positive | 7969143 - 7969376 | 8117.66 |
| cytochrome p450 | AMED_RS36965 | Not Available | Negative | 7969401 - 7970624 | 44835.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
