Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | AMED_RS36885 | Not Available | Negative | 7959329 - 7960504 | 41174.3 |
| 3-oxoacyl-acp reductase fabg | AMED_RS36890 | Not Available | Negative | 7960589 - 7961626 | 35532.4 |
| nad(p)-binding protein | AMED_RS49130 | Not Available | Positive | 7961980 - 7962204 | 8223.61 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS36895 | Not Available | Positive | 7962295 - 7963386 | 40183.5 |
| hypothetical protein | AMED_RS49135 | Not Available | Positive | 7963383 - 7963577 | 7127.43 |
| nuclear transport factor 2 family protein | AMED_RS36900 | Not Available | Negative | 7963625 - 7964023 | 14514.1 |
| nuclear transport factor 2 family protein | AMED_RS36905 | Not Available | Negative | 7964034 - 7964432 | 14475.0 |
| isochorismatase family protein | AMED_RS36910 | Not Available | Positive | 7964758 - 7965324 | 19930.9 |
| metal-dependent hydrolase | AMED_RS36915 | Not Available | Negative | 7965574 - 7966206 | 22544.0 |
| enoyl-coa hydratase | AMED_RS36920 | Not Available | Negative | 7966122 - 7966298 | 6278.49 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
