Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AMED_RS36735 | Not Available | Positive | 7927810 - 7928805 | 37157.6 |
| alpha/beta fold hydrolase | AMED_RS36740 | Not Available | Positive | 7928802 - 7929686 | 32872.3 |
| hydroxylase | AMED_RS36745 | Not Available | Positive | 7929676 - 7930857 | 42484.6 |
| flavin reductase family protein | AMED_RS36750 | Not Available | Positive | 7930871 - 7931389 | 18456.3 |
| mycofactocin-coupled sdr family oxidoreductase | AMED_RS36755 | Not Available | Positive | 7931416 - 7932273 | 30486.3 |
| pyridoxamine 5'-phosphate oxidase family protein | AMED_RS36760 | Not Available | Negative | 7932482 - 7932907 | 15348.2 |
| acetyl-coa c-acyltransferase | AMED_RS36765 | Not Available | Negative | 7933041 - 7934186 | 39670.3 |
| caib/baif coa-transferase family protein | AMED_RS36770 | Not Available | Negative | 7934183 - 7935298 | 38505.2 |
| metal-dependent hydrolase | AMED_RS36775 | Not Available | Negative | 7935365 - 7935994 | 21438.2 |
| acyl-coa dehydrogenase family protein | AMED_RS36780 | Not Available | Positive | 7936065 - 7937213 | 41349.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
