Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa-transferase family protein | AMED_RS36685 | Not Available | Negative | 7918086 - 7919306 | 43351.3 |
| ferredoxin | AMED_RS36690 | Not Available | Negative | 7919330 - 7919518 | 6540.65 |
| nad(p)-dependent oxidoreductase | AMED_RS36695 | Not Available | Negative | 7919515 - 7920327 | 27858.8 |
| mycofactocin-coupled sdr family oxidoreductase | AMED_RS36700 | Not Available | Negative | 7920346 - 7921164 | 28475.0 |
| hypothetical protein | AMED_RS36705 | Not Available | Negative | 7921161 - 7921361 | 7500.62 |
| amidohydrolase family protein | AMED_RS36710 | Not Available | Negative | 7921358 - 7922506 | 43349.3 |
| thiolase c-terminal domain-containing protein | AMED_RS36715 | Not Available | Positive | 7922695 - 7924335 | 57755.9 |
| hypothetical protein | AMED_RS36720 | Not Available | Negative | 7924378 - 7925112 | 26812.4 |
| fad-binding protein | AMED_RS36725 | Not Available | Negative | 7925145 - 7926749 | 56751.9 |
| iclr family transcriptional regulator | AMED_RS36730 | Not Available | Positive | 7926966 - 7927724 | 27254.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
