Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph:quinone oxidoreductase family protein | AMED_RS36635 | Not Available | Negative | 7907981 - 7908955 | 33389.4 |
| acyl-coa dehydrogenase family protein | AMED_RS36640 | Not Available | Negative | 7908952 - 7910112 | 42986.2 |
| acyl-coa dehydrogenase family protein | AMED_RS36645 | Not Available | Negative | 7910114 - 7911160 | 36461.5 |
| voc family protein | AMED_RS36650 | Not Available | Negative | 7911157 - 7911624 | 17020.3 |
| cytochrome p450 | AMED_RS36655 | Not Available | Negative | 7911630 - 7912829 | 45077.4 |
| crotonase/enoyl-coa hydratase family protein | AMED_RS36660 | Not Available | Negative | 7912887 - 7913651 | 26209.5 |
| phosphotransferase family protein | AMED_RS36665 | Not Available | Positive | 7913766 - 7914776 | 36080.4 |
| acyl-coa dehydrogenase family protein | AMED_RS36670 | Not Available | Positive | 7914785 - 7916104 | 48745.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS36675 | Not Available | Positive | 7916101 - 7916838 | 25489.4 |
| pentapeptide repeat-containing protein | AMED_RS49125 | Not Available | Positive | 7916886 - 7918073 | 42375.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
