Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type z 30s ribosomal protein s14 | AMED_RS03575 | Not Available | Positive | 751341 - 751526 | 6953.79 |
| 30s ribosomal protein s8 | AMED_RS03580 | Not Available | Positive | 751618 - 752016 | 14542.5 |
| 50s ribosomal protein l6 | AMED_RS03585 | Not Available | Positive | 752033 - 752572 | 19612.9 |
| 50s ribosomal protein l18 | AMED_RS03590 | Not Available | Positive | 752575 - 752973 | 14332.3 |
| 30s ribosomal protein s5 | AMED_RS03595 | Not Available | Positive | 753005 - 753652 | 22056.5 |
| 50s ribosomal protein l30 | AMED_RS03600 | Not Available | Positive | 753654 - 753839 | 6978.6 |
| 50s ribosomal protein l15 | AMED_RS03605 | Not Available | Positive | 753836 - 754282 | 15648.1 |
| hypothetical protein | AMED_RS48550 | Not Available | Positive | 754389 - 755435 | 35673.6 |
| lyse family translocator | AMED_RS03615 | Not Available | Positive | 755455 - 756069 | 21226.3 |
| preprotein translocase subunit secy | AMED_RS03620 | Not Available | Positive | 756324 - 757631 | 47313.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
