Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AMED_RS36585 | Not Available | Negative | 7895627 - 7896319 | 24075.6 |
| branched-chain amino acid abc transporter permease/atp-binding protein | AMED_RS36590 | Not Available | Negative | 7896343 - 7899087 | 94683.4 |
| abc transporter substrate-binding protein | AMED_RS36595 | Not Available | Negative | 7899095 - 7900444 | 45716.9 |
| hypothetical protein | AMED_RS36600 | Not Available | Negative | 7900564 - 7901007 | 15952.0 |
| acyl-coa dehydrogenase family protein | AMED_RS36605 | Not Available | Negative | 7901039 - 7902247 | 43246.2 |
| acyl-coa dehydrogenase family protein | AMED_RS36610 | Not Available | Positive | 7902372 - 7903496 | 39999.4 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS36615 | Not Available | Positive | 7903514 - 7904284 | 26203.6 |
| fadr/gntr family transcriptional regulator | AMED_RS36620 | Not Available | Positive | 7904382 - 7905866 | 53516.0 |
| maoc family dehydratase n-terminal domain-containing protein | AMED_RS36625 | Not Available | Negative | 7905955 - 7907190 | 46092.4 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS36630 | Not Available | Negative | 7907226 - 7907984 | 26176.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
