Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | AMED_RS36535 | Not Available | Negative | 7887600 - 7888337 | 25326.3 |
| carboxymuconolactone decarboxylase family protein | AMED_RS36540 | Not Available | Negative | 7888337 - 7888756 | 14458.1 |
| nuclear transport factor 2 family protein | AMED_RS36545 | Not Available | Positive | 7888995 - 7889429 | 15052.5 |
| tetr/acrr family transcriptional regulator | AMED_RS36550 | Not Available | Positive | 7889492 - 7890187 | 26614.1 |
| tetr/acrr family transcriptional regulator | AMED_RS36555 | Not Available | Negative | 7890554 - 7891261 | 25052.6 |
| nadp-dependent oxidoreductase | AMED_RS36560 | Not Available | Positive | 7891363 - 7892307 | 31163.1 |
| doxx family protein | AMED_RS36565 | Not Available | Positive | 7892349 - 7892720 | 12929.5 |
| llm class flavin-dependent oxidoreductase | AMED_RS36570 | Not Available | Positive | 7892746 - 7893795 | 37816.1 |
| nad(p)-dependent oxidoreductase | AMED_RS36575 | Not Available | Positive | 7893792 - 7894433 | 22767.4 |
| nad(p)h-binding protein | AMED_RS36580 | Not Available | Positive | 7894464 - 7895237 | 26328.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
