Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS36390 | Not Available | Positive | 7858848 - 7859177 | 12285.6 |
| gnat family n-acetyltransferase | AMED_RS36395 | Not Available | Negative | 7859207 - 7859779 | 20449.5 |
| hypothetical protein | AMED_RS36400 | Not Available | Negative | 7859832 - 7860425 | 19897.1 |
| mycofactocin biosynthesis chaperone mftb | AMED_RS49115 | Not Available | Negative | 7860729 - 7860860 | 4792.86 |
| mycofactocin precursor mfta | AMED_RS49120 | Not Available | Negative | 7860867 - 7860959 | 3280.97 |
| acyl-coa dehydrogenase family protein | AMED_RS36410 | Not Available | Negative | 7861075 - 7862223 | 41207.9 |
| 2,3-butanediol dehydrogenase | AMED_RS36415 | Not Available | Negative | 7862223 - 7863287 | 36967.7 |
| pyruvate dehydrogenase complex e1 component subunit beta | AMED_RS36420 | Not Available | Positive | 7863397 - 7865367 | 69939.6 |
| long-chain fatty acid--coa ligase | AMED_RS36425 | Not Available | Positive | 7865478 - 7866983 | 55228.1 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS36430 | Not Available | Positive | 7866980 - 7867717 | 25469.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
