Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | AMED_RS36335 | Not Available | Negative | 7852907 - 7853770 | 32322.3 |
| hypothetical protein | AMED_RS36340 | Not Available | Positive | 7854018 - 7854350 | 11958.8 |
| helix-turn-helix domain-containing protein | AMED_RS36345 | Not Available | Positive | 7854347 - 7854889 | 19383.1 |
| hypothetical protein | AMED_RS49110 | Not Available | Positive | 7855083 - 7855445 | 13108.8 |
| scr1 family ta system antitoxin-like transcriptional regulator | AMED_RS36355 | Not Available | Positive | 7855454 - 7856188 | 27710.2 |
| hypothetical protein | AMED_RS36360 | Not Available | Positive | 7856185 - 7856475 | 10912.1 |
| hypothetical protein | AMED_RS36365 | Not Available | Positive | 7856515 - 7856769 | 8915.64 |
| hypothetical protein | AMED_RS36370 | Not Available | Negative | 7856761 - 7857498 | 25753.8 |
| nudix domain-containing protein | AMED_RS36375 | Not Available | Negative | 7857512 - 7857928 | 15409.3 |
| taud/tfda family dioxygenase | AMED_RS36380 | Not Available | Positive | 7858094 - 7858504 | 14409.3 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
