Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS36285 | Not Available | Negative | 7845172 - 7845336 | 6096.26 |
| hypothetical protein | AMED_RS36290 | Not Available | Negative | 7845395 - 7845883 | 17369.4 |
| fad-dependent monooxygenase | AMED_RS36295 | Not Available | Negative | 7845894 - 7847099 | 43396.8 |
| mab_1171c family putative transporter | AMED_RS36300 | Not Available | Negative | 7847096 - 7848220 | 39896.3 |
| hypothetical protein | AMED_RS36305 | Not Available | Negative | 7848217 - 7848768 | 20686.6 |
| helix-turn-helix domain-containing protein | AMED_RS36310 | Not Available | Negative | 7848765 - 7849223 | 17163.1 |
| helix-turn-helix domain-containing protein | AMED_RS36315 | Not Available | Positive | 7849376 - 7849828 | 16715.9 |
| hypothetical protein | AMED_RS36320 | Not Available | Positive | 7850014 - 7851684 | 62106.7 |
| prepilin peptidase | AMED_RS36325 | Not Available | Negative | 7851679 - 7852308 | 21474.1 |
| duf397 domain-containing protein | AMED_RS36330 | Not Available | Negative | 7852694 - 7852885 | 6698.68 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
