Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | AMED_RS36190 | Not Available | Negative | 7829441 - 7830646 | 41747.7 |
| Trna-lys | Not Available | Not Available | Positive | 7830812 - 7830884 | Not Available |
| hypothetical protein | AMED_RS49095 | Not Available | Positive | 7831013 - 7831507 | 17610.1 |
| helix-turn-helix domain-containing protein | AMED_RS36205 | Not Available | Negative | 7832558 - 7832776 | 7435.28 |
| site-specific dna-methyltransferase | AMED_RS36210 | Not Available | Negative | 7832773 - 7833579 | 29757.1 |
| dna methyltransferase | AMED_RS36215 | Not Available | Negative | 7833576 - 7834037 | 16909.1 |
| hypothetical protein | AMED_RS36220 | Not Available | Positive | 7834300 - 7834530 | 8495.69 |
| btad domain-containing putative transcriptional regulator | AMED_RS36225 | Not Available | Negative | 7834549 - 7837242 | 95439.8 |
| hypothetical protein | AMED_RS36230 | Not Available | Negative | 7837257 - 7837661 | 13429.1 |
| hypothetical protein | AMED_RS36235 | Not Available | Negative | 7837658 - 7838080 | 14436.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
