Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m50 family metallopeptidase | AMED_RS36140 | Not Available | Negative | 7818768 - 7819553 | 26875.5 |
| is701 family transposase | AMED_RS36145 | Not Available | Positive | 7819751 - 7820884 | 42474.2 |
| dna-3-methyladenine glycosylase | AMED_RS36150 | Not Available | Negative | 7821227 - 7822132 | 32653.3 |
| m20 family metallopeptidase | AMED_RS36155 | Not Available | Positive | 7822402 - 7823724 | 45665.0 |
| s1c family serine protease | AMED_RS36160 | Not Available | Positive | 7823823 - 7824842 | 33543.9 |
| duf3224 domain-containing protein | AMED_RS36165 | Not Available | Negative | 7824958 - 7825332 | 13039.1 |
| helicase hera-like domain-containing protein | AMED_RS36170 | Not Available | Negative | 7825402 - 7826928 | 53368.8 |
| oligoribonuclease | AMED_RS36175 | Not Available | Positive | 7827042 - 7827650 | 22679.0 |
| Trna-his | Not Available | Not Available | Positive | 7827728 - 7827803 | Not Available |
| glycine betaine/l-proline transporter prop | AMED_RS36185 | Not Available | Positive | 7828038 - 7829444 | 50781.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
