Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l2 | AMED_RS03525 | Not Available | Positive | 746608 - 747444 | 30379.4 |
| 30s ribosomal protein s19 | AMED_RS03530 | Not Available | Positive | 747463 - 747744 | 10627.0 |
| 50s ribosomal protein l22 | AMED_RS03535 | Not Available | Positive | 747776 - 748195 | 15232.2 |
| 30s ribosomal protein s3 | AMED_RS03540 | Not Available | Positive | 748195 - 749034 | 30764.7 |
| 50s ribosomal protein l16 | AMED_RS03545 | Not Available | Positive | 749038 - 749457 | 15902.4 |
| 50s ribosomal protein l29 | AMED_RS03550 | Not Available | Positive | 749457 - 749705 | 9270.05 |
| 30s ribosomal protein s17 | AMED_RS03555 | Not Available | Positive | 749702 - 749980 | 10649.8 |
| 50s ribosomal protein l14 | AMED_RS03560 | Not Available | Positive | 750091 - 750459 | 13442.5 |
| 50s ribosomal protein l24 | AMED_RS03565 | Not Available | Positive | 750459 - 750773 | 11346.9 |
| 50s ribosomal protein l5 | AMED_RS03570 | Not Available | Positive | 750773 - 751336 | 21068.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
