Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | AMED_RS36040 | Not Available | Positive | 7796127 - 7797311 | 40742.7 |
| precorrin-4 c(11)-methyltransferase | AMED_RS36045 | Not Available | Positive | 7797308 - 7798069 | 26383.8 |
| gfo/idh/moca family protein | AMED_RS36050 | Not Available | Positive | 7798066 - 7799082 | 36103.7 |
| cobalt-precorrin-6a reductase | AMED_RS36055 | Not Available | Positive | 7799079 - 7799798 | 25960.3 |
| 5,6-dimethylbenzimidazole synthase | AMED_RS36060 | Not Available | Positive | 7799795 - 7800454 | 24113.8 |
| arabinosyltransferase domain-containing protein | AMED_RS36065 | Not Available | Positive | 7800473 - 7803565 | 110631.0 |
| precorrin-2 c(20)-methyltransferase | AMED_RS36070 | Not Available | Negative | 7803629 - 7805116 | 52341.2 |
| precorrin-8x methylmutase | AMED_RS36075 | Not Available | Negative | 7805113 - 7805736 | 21657.2 |
| nitrite/sulfite reductase | AMED_RS36080 | Not Available | Negative | 7805733 - 7806809 | 37045.2 |
| duf6191 domain-containing protein | AMED_RS36085 | Not Available | Negative | 7806814 - 7807128 | 11613.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
