Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yigz family protein | AMED_RS35940 | Not Available | Negative | 7771935 - 7772582 | 23330.7 |
| glutamate synthase large subunit | AMED_RS35945 | Not Available | Positive | 7773164 - 7777714 | 165652.0 |
| glutamate synthase subunit beta | AMED_RS35950 | Not Available | Positive | 7777707 - 7779158 | 52441.6 |
| sdr family oxidoreductase | AMED_RS35955 | Not Available | Negative | 7779216 - 7780088 | 30069.9 |
| tetr/acrr family transcriptional regulator | AMED_RS35960 | Not Available | Positive | 7780172 - 7780744 | 20589.6 |
| dyp-type peroxidase | AMED_RS35965 | Not Available | Positive | 7780946 - 7782346 | 49892.5 |
| rok family protein | AMED_RS35970 | Not Available | Negative | 7782399 - 7783295 | 30509.5 |
| cbtb-domain containing protein | AMED_RS35975 | Not Available | Positive | 7783492 - 7783701 | 7597.38 |
| cbta family protein | AMED_RS35980 | Not Available | Positive | 7783721 - 7784458 | 25441.3 |
| cobyric acid synthase | AMED_RS35985 | Not Available | Negative | 7784731 - 7786212 | 51523.4 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
