Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS35890 | Not Available | Positive | 7761264 - 7761896 | 22435.2 |
| php domain-containing protein | AMED_RS35895 | Not Available | Positive | 7761910 - 7762728 | 28164.6 |
| abc transporter atp-binding protein | AMED_RS35900 | Not Available | Positive | 7762847 - 7763656 | 28097.0 |
| abc transporter atp-binding protein | AMED_RS35905 | Not Available | Positive | 7763644 - 7764483 | 29050.2 |
| branched-chain amino acid abc transporter permease | AMED_RS35910 | Not Available | Positive | 7764480 - 7765358 | 30394.7 |
| branched-chain amino acid abc transporter permease | AMED_RS35915 | Not Available | Positive | 7765366 - 7766508 | 39346.6 |
| abc transporter substrate-binding protein | AMED_RS35920 | Not Available | Positive | 7766505 - 7767755 | 43061.3 |
| hypothetical protein | AMED_RS35925 | Not Available | Positive | 7768045 - 7768302 | 8814.63 |
| gnat family n-acetyltransferase | AMED_RS35930 | Not Available | Positive | 7768343 - 7768942 | 22697.7 |
| gh92 family glycosyl hydrolase | AMED_RS35935 | Not Available | Negative | 7768933 - 7771635 | 94020.5 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
