Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose-1-phosphate isomerase | AMED_RS35840 | Not Available | Positive | 7751625 - 7752614 | 34502.4 |
| hypothetical protein | AMED_RS35845 | Not Available | Negative | 7752639 - 7753079 | 15016.7 |
| ferredoxin | AMED_RS35850 | Not Available | Negative | 7753183 - 7753398 | 7396.72 |
| cytochrome p450 | AMED_RS35855 | Not Available | Negative | 7753402 - 7754592 | 43956.0 |
| padr family transcriptional regulator | AMED_RS35860 | Not Available | Positive | 7754769 - 7755278 | 18946.7 |
| cytochrome p450 | AMED_RS35865 | Not Available | Positive | 7755275 - 7756489 | 44303.5 |
| ferredoxin | AMED_RS35870 | Not Available | Positive | 7756494 - 7756691 | 6617.75 |
| tetr/acrr family transcriptional regulator | AMED_RS35875 | Not Available | Positive | 7756735 - 7757307 | 20696.7 |
| fad-binding and (fe-s)-binding domain-containing protein | AMED_RS35880 | Not Available | Negative | 7757308 - 7760043 | 97718.8 |
| gaf domain-containing protein | AMED_RS35885 | Not Available | Positive | 7760128 - 7761267 | 40404.7 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
