Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna methyltransferase | AMED_RS49735 | Not Available | Positive | 7743705 - 7743959 | 9260.96 |
| hypothetical protein | AMED_RS35795 | Not Available | Positive | 7744014 - 7744475 | 17199.3 |
| translation initiation factor if-1 | AMED_RS35800 | Not Available | Negative | 7744604 - 7744825 | 8416.33 |
| n-acetyltransferase | AMED_RS35805 | Not Available | Negative | 7744825 - 7745523 | 25153.1 |
| glyoxalase | AMED_RS35810 | Not Available | Positive | 7745773 - 7746399 | 21585.5 |
| plp-dependent aminotransferase family protein | AMED_RS35815 | Not Available | Negative | 7746407 - 7747810 | 49830.7 |
| mfs transporter | AMED_RS35820 | Not Available | Positive | 7747858 - 7749012 | 38656.0 |
| fpg/nei family dna glycosylase | AMED_RS35825 | Not Available | Positive | 7749028 - 7749819 | 28843.3 |
| dinb family protein | AMED_RS35830 | Not Available | Negative | 7749710 - 7750273 | 19870.3 |
| pig-l family deacetylase | AMED_RS35835 | Not Available | Positive | 7750349 - 7751143 | 28923.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
