Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AMED_RS35740 | Not Available | Positive | 7734032 - 7735231 | 40717.5 |
| hypothetical protein | AMED_RS35745 | Not Available | Negative | 7735312 - 7735620 | 11931.8 |
| diguanylate cyclase | AMED_RS35750 | Not Available | Positive | 7735828 - 7737102 | 44763.3 |
| hypothetical protein | AMED_RS35755 | Not Available | Negative | 7737155 - 7737403 | 8820.01 |
| trpb-like pyridoxal phosphate-dependent enzyme | AMED_RS35760 | Not Available | Negative | 7737656 - 7739008 | 48804.1 |
| dienelactone hydrolase family protein | AMED_RS35765 | Not Available | Positive | 7739074 - 7739751 | 23604.8 |
| hypothetical protein | AMED_RS35770 | Not Available | Positive | 7739876 - 7740289 | 14366.4 |
| hypothetical protein | AMED_RS35775 | Not Available | Negative | 7740333 - 7741961 | 56273.4 |
| rna polymerase sigma factor | AMED_RS35780 | Not Available | Negative | 7742047 - 7743270 | 44455.3 |
| ycii family protein | AMED_RS35785 | Not Available | Negative | 7743267 - 7743590 | 11847.8 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
