Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybab/ebfc family nucleoid-associated protein | AMED_RS03480 | Not Available | Negative | 738376 - 738657 | 9471.19 |
| hypothetical protein | AMED_RS47915 | Not Available | Positive | 738815 - 738970 | 5143.75 |
| 30s ribosomal protein s12 | AMED_RS03485 | Not Available | Positive | 739875 - 740249 | 13765.9 |
| 30s ribosomal protein s7 | AMED_RS03490 | Not Available | Positive | 740249 - 740719 | 17462.2 |
| elongation factor g | AMED_RS03495 | Not Available | Positive | 740783 - 742882 | 76988.2 |
| elongation factor tu | AMED_RS03500 | Not Available | Positive | 743015 - 744208 | 43772.3 |
| 30s ribosomal protein s10 | AMED_RS03505 | Not Available | Positive | 744602 - 744907 | 11533.1 |
| 50s ribosomal protein l3 | AMED_RS03510 | Not Available | Positive | 744942 - 745598 | 22985.7 |
| 50s ribosomal protein l4 | AMED_RS03515 | Not Available | Positive | 745595 - 746284 | 24526.2 |
| 50s ribosomal protein l23 | AMED_RS03520 | Not Available | Positive | 746281 - 746592 | 11323.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
