Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| creatininase family protein | AMED_RS35590 | Not Available | Positive | 7695678 - 7696430 | 27244.6 |
| benzoate-coa ligase family protein | AMED_RS35595 | Not Available | Positive | 7696423 - 7697937 | 53993.6 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS35600 | Not Available | Positive | 7697934 - 7698626 | 23429.5 |
| enoyl-coa hydratase family protein | AMED_RS35605 | Not Available | Positive | 7698623 - 7699450 | 29365.4 |
| amidohydrolase | AMED_RS35610 | Not Available | Negative | 7699460 - 7701070 | 56952.0 |
| aaa family atpase | AMED_RS35615 | Not Available | Negative | 7701070 - 7703403 | 85313.8 |
| hypothetical protein | AMED_RS35620 | Not Available | Negative | 7703396 - 7703800 | 13254.0 |
| voc family protein | AMED_RS35625 | Not Available | Negative | 7704025 - 7704414 | 14231.7 |
| smp-30/gluconolactonase/lre family protein | AMED_RS35630 | Not Available | Negative | 7704414 - 7705331 | 32320.3 |
| histidine phosphatase family protein | AMED_RS35635 | Not Available | Negative | 7705342 - 7705998 | 22965.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
