Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carotenoid oxygenase family protein | AMED_RS35540 | Not Available | Negative | 7685989 - 7687461 | 54686.4 |
| helix-turn-helix domain-containing protein | AMED_RS35545 | Not Available | Positive | 7687589 - 7688545 | 35864.6 |
| duf5302 domain-containing protein | AMED_RS35550 | Not Available | Positive | 7688628 - 7688813 | 6722.67 |
| mbl fold metallo-hydrolase | AMED_RS35555 | Not Available | Negative | 7688854 - 7689783 | 32594.9 |
| lysr substrate-binding domain-containing protein | AMED_RS35560 | Not Available | Positive | 7689868 - 7690812 | 34353.6 |
| serine hydrolase | AMED_RS35565 | Not Available | Negative | 7690797 - 7691597 | 28002.2 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | AMED_RS35570 | Not Available | Negative | 7691594 - 7692667 | 37373.5 |
| kynureninase | AMED_RS35575 | Not Available | Negative | 7692833 - 7694026 | 43442.6 |
| tryptophan 2,3-dioxygenase | AMED_RS35580 | Not Available | Negative | 7694023 - 7694817 | 29874.5 |
| paax family transcriptional regulator c-terminal domain-containing protein | AMED_RS35585 | Not Available | Negative | 7694814 - 7695629 | 30314.1 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
