Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | AMED_RS35440 | Not Available | Positive | 7665268 - 7666308 | 36583.1 |
| duf993 family protein | AMED_RS35445 | Not Available | Positive | 7666391 - 7667542 | 40378.9 |
| sugar phosphate isomerase/epimerase | AMED_RS35450 | Not Available | Positive | 7667542 - 7668354 | 28312.7 |
| iclr family transcriptional regulator | AMED_RS35455 | Not Available | Positive | 7668558 - 7669220 | 23278.9 |
| response regulator transcription factor | AMED_RS35460 | Not Available | Positive | 7669267 - 7669980 | 25562.9 |
| hamp domain-containing sensor histidine kinase | AMED_RS35465 | Not Available | Positive | 7669983 - 7671266 | 44565.3 |
| sco6745 family protein | AMED_RS35470 | Not Available | Negative | 7671409 - 7672242 | 29616.7 |
| amino acid permease | AMED_RS35475 | Not Available | Positive | 7672454 - 7673845 | 48212.0 |
| carbon-nitrogen hydrolase family protein | AMED_RS35480 | Not Available | Positive | 7673842 - 7674585 | 26650.6 |
| nad(p)/fad-dependent oxidoreductase | AMED_RS35485 | Not Available | Positive | 7674582 - 7676273 | 62098.6 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
