Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lvivd repeat-containing protein | AMED_RS35390 | Not Available | Negative | 7653903 - 7655237 | 47816.8 |
| abc transporter substrate-binding protein | AMED_RS35395 | Not Available | Positive | 7655434 - 7656879 | 50050.4 |
| lysr family transcriptional regulator | AMED_RS35400 | Not Available | Negative | 7657060 - 7657938 | 30818.2 |
| sdr family oxidoreductase | AMED_RS35405 | Not Available | Positive | 7658010 - 7659011 | 36569.7 |
| sdr family oxidoreductase | AMED_RS35410 | Not Available | Negative | 7659008 - 7659742 | 25656.6 |
| s8 family serine peptidase | AMED_RS35415 | Not Available | Negative | 7659802 - 7661715 | 64043.3 |
| gnat family n-acetyltransferase | AMED_RS35420 | Not Available | Positive | 7661917 - 7662363 | 16227.5 |
| dihydrolipoyl dehydrogenase | AMED_RS35425 | Not Available | Negative | 7662353 - 7663744 | 49518.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AMED_RS35430 | Not Available | Negative | 7663793 - 7664557 | 27618.7 |
| nitroreductase family deazaflavin-dependent oxidoreductase | AMED_RS35435 | Not Available | Negative | 7664647 - 7665051 | 15262.0 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
