Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS35195 | Not Available | Positive | 7604625 - 7605200 | 21622.7 |
| copper resistance copc/copd family protein | AMED_RS35200 | Not Available | Positive | 7605197 - 7606525 | 45199.6 |
| maleylpyruvate isomerase family mycothiol-dependent enzyme | AMED_RS35205 | Not Available | Negative | 7606528 - 7607202 | 23621.3 |
| m protein | AMED_RS35210 | Not Available | Positive | 7607626 - 7608693 | 38957.6 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS35215 | Not Available | Positive | 7608728 - 7609462 | 25585.7 |
| metal-sensitive transcriptional regulator | AMED_RS35220 | Not Available | Negative | 7609459 - 7609740 | 10254.3 |
| cation-translocating p-type atpase | AMED_RS35225 | Not Available | Negative | 7609797 - 7611893 | 71658.0 |
| heavy-metal-associated domain-containing protein | AMED_RS35230 | Not Available | Negative | 7611890 - 7612096 | 7123.23 |
| precorrin-6a synthase (deacetylating) | AMED_RS35235 | Not Available | Positive | 7612174 - 7612935 | 28161.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 7613174 - 7613290 | Not Available |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
