Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf899 family protein | AMED_RS35150 | Not Available | Positive | 7592039 - 7592539 | 17977.3 |
| sensor histidine kinase | AMED_RS35155 | Not Available | Positive | 7592721 - 7595075 | 84158.3 |
| dna-binding response regulator | AMED_RS35160 | Not Available | Negative | 7595103 - 7595708 | 21525.4 |
| hypothetical protein | AMED_RS48140 | Not Available | Negative | 7596013 - 7596189 | 6108.23 |
| helix-turn-helix domain-containing protein | AMED_RS35165 | Not Available | Positive | 7596644 - 7597396 | 26547.2 |
| dna-binding response regulator | AMED_RS35170 | Not Available | Positive | 7597628 - 7598233 | 21519.1 |
| sensor histidine kinase | AMED_RS35175 | Not Available | Negative | 7598464 - 7599648 | 40567.0 |
| sagb/thcox family dehydrogenase | AMED_RS35180 | Not Available | Negative | 7599709 - 7601157 | 51075.2 |
| tomm precursor leader peptide-binding protein | AMED_RS35185 | Not Available | Negative | 7601204 - 7603513 | 82991.0 |
| winged helix-turn-helix transcriptional regulator | AMED_RS35190 | Not Available | Positive | 7603805 - 7604497 | 25126.2 |
Pathways
1219 pathways
Health Effects
No health effects information available for this bacterium.
